Publications

GABRIEL scientific publications

Demuth T., Rennert J.L., Hoelzinger D.B., Reavie L.B., Nakada M., Beaudry C., Nakada S., Anderson E.M., Henrichs A.N., McDonough W.S., Holz D., Joy A., Lin R., Pan K.H., Lih C.J., Cohen S.N., Berens M.E. Glioma cells on the run - the migratory transcriptome of 10 human glioma cell lines. BMC Genomics, 9:54, 2008.

Lih C.J., Wei W, Cohen S.N. Txr1: a transcriptional regulator of thrombospondin-1 that modulates cellular sensitivity to taxanes. Genes Dev., 20:2082-2095, 2006.

Fong C.W., Chua M.-S., McKie A.B., Ling S.H., Mason V, Li R, Yusoff P, Lo T.L., Leung H.Y., So S.K., Guy G.R. Sprouty 2, an inhibitor of mitogen-activated protein kinase signaling, is down-regulated in hepatocellular carcinoma. Cancer Res. 2006 Feb 15; 66 (4):2048-58.

Pan K.-H, Lih C.-J, Cohen S.N. Effects of threshold choice on biological conclusions reached during analysis of gene expression by DNA microarrays. Proc. Natl. Acad. Sci. USA 102(25): 8961-8965, 2005.

Patil MA, Chua M.-S, Pan K.-H, Lin R, Lih C.-J, Cheung ST, Ho C, Li R, Fan ST, Cohen SN, Chen X, So S. An integrated data analysis approach to characterize genes highly expressed in hepatocellular carcinoma. Oncogene, 24: 3737-47, 2005.

Bernstein, J.A., Lin, P.-H., Cohen, S.N. and Lin-Chao, S. Global analysis of E. coli RNA degradosome function using DNA microarrays. Proc. Natl. Acad. Sci. USA, 101: 2758-63, 2004.

Zhang, H., Herbert B.-S., Pan, K.-H., Shay, J.W., and Cohen, S.N. Disparate effects of telomere attrition on gene expression during replicative senescence of human mammary epithelial cells cultured under different conditions. Oncogene, 23: 6193-6198, 2004.

Zhang, H., Pan, K.H., and Cohen, S.N. Senescence-specific gene expression fingerprints reveal cell-type-dependent physical clustering of up-regulated chromosomal loci. Proc. Natl. Acad. Sci. USA, 100(6): 3251-3256, 2003.

Bao, K., Cohen S.N. Recruitment of terminal protein to the ends of Streptomyces linear plasmids and chromosomes by a novel telomere binding protein essential for linear DNA replication. Genes Dev. 17(6): 774-785, 2003.

Pan, K.-H., Lih, C.-J., and Cohen, S.N. Analysis of DNA microarrays using algorithms that employ rule-based expert knowledge. Proc. Natl. Acad. Sci. USA 99: 2118-2123, 2002.

Huang, J., Lih, C.-J., Pan, K.-H. and Cohen, S.N. Global analysis of growth phase responsive gene expression and regulation of antibiotic biosynthetic pathways in Streptomyces coelicolor using DNA microarrays. Genes Dev. 15: 3183-3192, 2001.











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Last updated: February 11, 2005